Taxon	HAKU.02057.01	HAKU.02057.04	HAKU.04092.05	HAKU.06449.04	HAKU.06601.03	HAKU.06641.01	HAKU.06912.03	HAKU.07031.01	HAKU.13051.01	HAKU.13110.01	HAKU.14131.03	HAKU.14257.05	HAKU.15133.03	HAKU.16255.02	HAKU.17164.01	HAKU.17164.06	HAKU.17282.03	HAKU.19122.01	HAKU.21294.01	HAKU.23313.04	HAKU.25705.02
Treponema denticola (SP1)	25	0	10	6	0	3	40	27	146	0	0	5	12	18	53	0	0	280	60	3	153
Peptostreptococcaceae_[XI][G-7] [Eubacterium]_yurii_subsps._yurii_&_margaretiae (SP100)	0	0	0	0	0	0	0	0	105	0	0	5	0	1	24	0	0	251	0	0	366
Peptoanaerobacter [Eubacterium] yurii (SP101)	12	0	2	0	0	12	6	23	16	0	0	0	2	2	1	40	0	16	3	0	28
Veillonella sp._HMT_780 (SP106)	2426	115	253	576	0	0	4	257	80	0	242	54	64	70	8	22	9	496	39	1333	250
Fusobacterium nucleatum_subsp._polymorphum (SP112)	31	1	4	11	0	0	14	1	10	0	25	0	0	9	0	11	4	8	0	12	4
Streptococcus sp._HMT_064 (SP12)	63	357	9	212	227	361	20	60	0	226	9	0	478	34	237	0	2	42	26	95	122
Lactobacillus taiwanensis (SP120)	583	292	52	64	9	5	198	259	33	3	0	4	3	93	50	28	45	78	43	18	22
Peptoniphilaceae_[G-1] bacterium_HMT_113 (SP123)	0	0	0	0	0	0	0	0	21	0	0	0	0	0	0	0	0	0	83	0	10
Selenomonas noxia (SP129)	0	0	2	0	0	0	15	0	0	0	3	22	0	0	0	0	0	0	0	73	365
Gemella haemolysans (SP137)	0	0	6	0	0	0	5	0	144	0	0	0	40	0	34	0	0	768	0	4	372
Gemella sanguinis (SP139)	0	44	7	9	10	2	4	14	33	0	0	5	11	15	1	11	11	120	43	7	57
Streptococcus downii (SP14)	301	360	88	14	43	54	38	638	93	63	69	7	163	300	61	55	59	243	221	31	251
Leptotrichia hofstadii (SP140)	359	68	12	25	30	16	0	31	47	58	24	12	29	30	72	55	1	61	119	68	42
Lachnoanaerobaculum saburreum (SP153)	163	50	5	0	15	4	0	106	17	15	4	5	62	58	8	98	0	57	164	23	11
Rosenbergiella australiborealis (SP157)	0	0	6	26	0	0	3	0	193	0	4	0	9	0	6	112	0	54	0	18	67
Haemophilus paraphrohaemolyticus (SP189)	0	0	0	3	0	2	14	18	0	0	4	0	12	0	7	0	29	5	95	2	2
Streptococcus oralis_subsp._dentisani_clade_398 (SP19)	11	26	2	11	4	13	2	0	5	40	0	62	0	0	8	9	6	5	5	17	8
Haemophilus sputorum (SP190)	21	12	179	450	0	33	222	148	291	9	73	25	168	1360	75	264	2	2074	343	171	1837
Alloprevotella tannerae (SP191)	0	20	43	97	13	33	232	107	207	0	59	80	23	302	27	304	0	392	82	37	122
Leptotrichia sp._HMT_909 (SP192)	3	6	0	21	0	0	0	2	2	0	0	0	1	1	0	3	0	105	17	3	0
Aggregatibacter aphrophilus (SP195)	68	69	5	79	55	38	3	426	15	5	6	8	24	208	14	27	74	107	50	19	46
Aggregatibacter paraphrophilus (SP196)	109	171	16	83	9	8	242	308	60	15	29	9	30	20	51	518	0	158	129	23	77
Lautropia mirabilis (SP197)	3024	1143	2296	369	2094	352	5116	204	748	1702	1173	394	472	2399	648	401	1039	598	152	322	175
Streptococcus sp._HMT_061 (SP20)	1808	1606	92	3156	1028	342	587	67	7	320	47	180	1394	46	569	80	6	167	1018	780	214
Bacillus paramobilis (SP220)	0	0	146	0	25	1	0	0	0	0	0	12	26	44	3	0	0	119	0	6	0
Bacillus paranthracis (SP221)	38	1	37	36	0	15	80	979	374	2	20	6	28	31	12	658	1	611	72	50	719
Bacillus mycoides (SP224)	76	169	24	19	64	24	18	59	24	9	23	38	20	100	17	92	135	48	47	46	101
Bacillus gaemokensis (SP225)	53	54	2	6	1	23	0	566	1	5	2	0	18	54	0	34	0	43	88	0	0
Mogibacterium vescum (SP23)	63	1	11	33	1	1	4	8	73	5	0	28	9	19	49	128	0	54	44	18	28
Mogibacterium neglectum (SP24)	0	6	4	10	1	1	0	82	0	8	0	1	7	13	0	3	9	9	0	4	4
Alloprevotella sp._HMT_473 (SP248)	4148	34	934	291	0	2	35	327	165	0	977	47	8	207	0	13	6	292	0	1088	31
Mogibacterium diversum (SP26)	224	171	2050	81	34	1650	95	21	668	1536	431	6	141	4798	523	198	982	590	109	121	64
Prevotella salivae (SP263)	119	204	309	0	57	282	4	142	1110	268	185	49	19	1102	141	295	370	117	129	195	338
Porphyromonas sp._HMT_930 (SP266)	1	39	57	698	3	0	0	36	69	0	1261	8	168	19	1	0	246	52	0	279	3
Prevotella histicola (SP27)	42	249	2989	26	30	340	21	64	1344	2242	686	9	24	2003	686	432	1259	119	18	115	75
Escherichia fergusonii (SP272)	0	0	28	22	0	0	269	0	1	0	0	20	2	665	17	0	0	453	0	3	64
Escherichia marmotae (SP273)	4	0	0	8	0	13	0	0	1	0	1	0	0	8	0	0	0	1	0	0	0
Shigella sonnei (SP276)	0	0	3	0	0	0	8	0	19	0	0	0	0	0	9	0	0	100	0	0	14
Porphyromonas gingivalis (SP277)	0	0	0	0	0	0	0	2	397	0	0	0	8	0	64	0	0	992	112	3	705
Veillonellaceae_[G-1] bacterium_HMT_155 (SP278)	50	28	1	0	1	1	1	66	2	1	0	0	0	5	1	77	0	40	49	1	2
Leptotrichia sp._HMT_215 (SP28)	428	173	208	5	13	979	62	711	259	120	76	0	142	186	151	305	27	272	411	10	80
Prevotella sp._HMT_309 (SP29)	2	6	88	10	0	2	1	0	94	0	36	0	0	39	20	0	39	12	0	1	0
Knoellia remsis (SP296)	33	9	0	0	13	5	0	54	0	1	6	0	14	50	0	3	3	1	3	3	1
Prevotella denticola (SP297)	498	40	3	0	11	2	12	36	64	46	14	44	0	185	49	205	0	186	39	21	185
Prevotella sp._HMT_942 (SP298)	926	14	37	48	1	0	0	14	6	0	206	0	1	0	0	0	4	12	0	24	1
Rothia aeria (SP300)	147	18	27	42	525	71	328	53	2	409	3	20	50	3	195	0	63	217	148	432	125
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP301)	0	7	0	32	1	1	0	240	2	0	0	0	6	15	1	16	10	25	0	2	2
Veillonella tobetsuensis (SP303)	19	22	23	21	3	280	10	224	346	126	6	4	39	99	106	76	13	57	189	10	8
Veillonella rogosae (SP304)	572	57	80	58	92	19	54	149	242	63	36	18	37	668	107	256	32	254	118	103	142
Schaalia lingnae (SP315)	5	2	39	0	0	298	6	25	116	162	1	0	12	29	53	95	10	12	62	0	8
Lachnospiraceae_[G-8] bacterium_HMT_500 (SP316)	0	0	5	0	1	1	6	2	21	0	0	0	5	1	12	0	0	199	0	0	43
Veillonella atypica (SP318)	309	4	3	23	46	5	30	17	0	3	1	0	0	50	4	19	92	2	163	6	21
Streptobacillus felis (SP320)	0	0	0	40	0	0	0	0	463	0	0	0	0	0	0	0	0	1075	0	0	0
Prevotella nanceiensis (SP322)	35	17	139	27	26	177	33	127	39	374	60	0	15	15	19	7	47	37	5	17	2
Riemerella sp._HMT_322 (SP323)	13	11	11	10	12	33	37	97	10	49	31	2	12	98	17	9	145	76	8	9	14
Streptococcus sp._HMT_056 (SP324)	154	51	106	10	303	93	10	18	285	38	91	144	95	30	106	138	46	63	71	277	70
Streptococcus himalayensis (SP325)	322	10	10	78	7	2	11	37	0	2	8	7	10	0	0	5	45	1	56	3	14
Prevotella sp._HMT_313 (SP333)	31	27	11	10	9	4	11	142	42	8	3	15	6	103	29	54	14	120	33	2	51
Mycoplasma faucium (SP334)	0	0	44	7	0	0	6	21	52	0	0	12	4	9	0	0	0	104	0	6	200
Neisseria oralis (SP336)	946	290	117	1635	141	87	1088	1	0	1	155	140	632	128	1	0	433	586	1722	155	118
Actinomyces johnsonii (SP339)	260	94	25	35	98	12	74	247	172	25	12	12	16	120	11	105	43	152	471	59	78
Prevotella sp._HMT_526 (SP341)	260	669	13	12	96	4	4	54	57	137	32	172	41	154	21	612	10	120	47	146	151
Peptostreptococcaceae_[XI][G-7] bacterium_HMT_081 (SP342)	664	438	442	42	37	1108	0	62	193	13	49	74	11	22	351	437	32	165	169	190	25
Staphylococcus caprae (SP351)	30	35	3	19	0	822	6	438	752	26	0	2	41	37	186	259	11	723	74	10	149
Staphylococcus aureus (SP353)	15	9	3	0	11	32	4	78	19	16	2	158	5	6	12	106	0	10	319	28	292
Staphylococcus petrasii (SP354)	398	336	1545	181	52	1709	664	3257	568	756	387	0	643	947	774	217	311	736	175	27	29
Staphylococcus simiae (SP358)	14	0	0	0	0	0	0	9	19	0	0	0	0	5	1	0	0	27	3	0	2
Staphylococcus saccharolyticus (SP359)	1	5	0	0	0	25	1	9	3	4	15	0	2	24	4	4	38	12	0	0	0
Staphylococcus warneri (SP361)	180	50	13	68	68	4	62	49	115	2	17	63	36	356	130	39	21	115	20	105	5
Capnocytophaga sputigena (SP37)	21	0	0	5	0	14	9	78	12	8	0	20	16	7	47	480	0	251	148	17	75
Alloprevotella sp._HMT_308 (SP38)	7	14	177	8	13	14	77	7	18	139	39	0	3	222	5	12	188	13	2	4	13
Streptococcus lactarius (SP380)	898	603	1255	1165	539	7031	660	721	1310	5017	43	79	1336	2089	4105	2283	343	3274	2901	328	1855
Brevibacterium celere (SP384)	35	0	39	0	0	0	0	0	0	0	0	0	27	3	0	0	0	0	0	11	0
Brevibacterium iodinum (SP385)	407	4857	298	120	19	220	0	8	547	51	172	95	3	40	125	0	21	68	96	282	85
Brevibacterium ammoniilyticum (SP388)	0	15	4	0	10	0	2	0	25	0	0	2	7	44	0	0	1	22	14	0	6
Bifidobacterium dentium (SP397)	0	7	8	23	59	12	3	33	0	11	1	2	31	39	6	5	23	61	56	11	2
Bifidobacterium moukalabense (SP398)	253	1156	59	68	112	2	0	1391	4	15	20	50	26	165	26	91	49	325	228	244	105
Neisseria sp._HMT_018 (SP399)	0	0	0	0	0	17	4	0	0	31	0	0	11	0	0	3	0	0	0	0	0
Veillonellaceae_[G-1] bacterium_HMT_148 (SP40)	0	0	9	9	0	10	9	0	55	0	0	1	13	7	61	9	1	129	42	0	249
Capnocytophaga sp._HMT_332 (SP400)	3	1	1	8	12	3	0	31	0	0	3	2	3	29	0	4	7	26	18	2	8
Peptoanaerobacter stomatis (SP402)	0	1	0	0	0	2	0	20	25	0	0	0	17	1	9	1	0	25	0	0	291
Porphyromonas sp._HMT_285 (SP411)	0	0	57	0	0	0	0	0	0	0	0	0	16	37	0	0	0	0	0	14	0
Kocuria assamensis (SP430)	3	33	10	23	37	35	1	249	2	12	8	3	31	46	17	20	63	144	60	12	23
Selenomonas noxia (SP431)	6	5	10	18	27	5	6	89	11	9	17	29	8	38	1	208	5	67	586	12	19
Granulicatella adiacens (SP432)	290	352	1065	221	163	4084	346	891	1151	3144	52	19	672	851	1267	911	164	1076	2836	282	629
Prevotella multisaccharivorax (SP433)	204	0	0	0	0	8	0	115	69	0	0	2	0	118	0	0	0	0	34	0	385
Acinetobacter junii (SP440)	116	13	0	0	9	0	0	52	6	2	1	15	0	16	15	103	0	41	14	0	19
Acinetobacter guillouiae (SP441)	17	86	34	4	5	28	57	8	49	15	8	0	3	15	47	96	31	78	83	2	52
Acinetobacter gyllenbergii (SP444)	20	5	2	18	0	10	23	44	0	0	5	7	4	0	9	51	0	144	35	0	6
Acinetobacter vivianii (SP445)	10	20	15	0	0	1	28	0	2	6	16	18	2	43	1	9	0	29	0	0	0
Acinetobacter proteolyticus (SP448)	144	17	43	7	127	225	13	14	0	128	5	8	9	9	9	4	12	22	122	71	40
Lancefieldella parvula (SP455)	134	33	102	27	4	1143	28	170	825	919	30	4	18	305	271	474	46	96	281	64	70
Capnocytophaga sp._HMT_324 (SP459)	93	17	70	10	0	48	65	61	91	87	25	15	6	50	64	574	4	62	251	39	18
Treponema sp._HMT_251 (SP46)	14	35	30	35	127	35	21	10	14	6	26	5	38	18	14	16	108	187	10	11	102
Treponema sp._HMT_250 (SP47)	11	94	79	38	112	7	28	24	2	32	12	262	10	55	9	38	56	40	157	22	43
Lancefieldella rimae (SP483)	0	47	13	0	1	0	4	186	1	0	0	0	10	54	0	0	14	12	3	18	0
Peptidiphaga gingivicola (SP485)	15	8	42	26	55	25	27	0	30	8	0	289	16	0	25	88	0	101	49	82	127
Prevotella maculosa (SP496)	34	178	16	6	27	1	19	64	5	2	8	5	15	19	7	27	2	16	9	27	21
Prevotella sp._HMT_317 (SP497)	42	88	6	14	55	1	15	13	3	1	35	1	10	13	15	10	16	45	6	21	31
Prevotella shahii (SP498)	13	14	0	8	0	128	3	0	0	0	0	0	4	2	0	0	0	49	0	0	1
Haemophilus parainfluenzae (SP499)	525	1238	4245	839	1403	7128	1994	2542	2036	7164	1510	5	2691	1775	2250	640	5903	1304	1933	512	785
Lactobacillus salivarius (SP50)	193	0	9	0	0	78	4	279	71	38	0	7	42	19	123	13	0	269	263	192	257
Prevotella pallens (SP500)	178	67	223	19	35	189	1	183	1309	51	70	0	8	222	149	115	152	233	47	117	185
Capnocytophaga sp._HMT_864 (SP502)	0	0	53	0	0	2	26	52	0	0	0	4	0	20	0	0	16	118	22	0	28
Veillonellaceae_[G-1] bacterium_HMT_132 (SP507)	82	14	0	2	1	292	20	84	0	257	105	0	33	49	135	633	0	55	303	6	0
Prevotella sp._HMT_472 (SP509)	0	16	0	3	55	3	5	29	0	9	1	1	0	6	0	0	5	16	0	0	14
Oribacterium sinus (SP510)	108	50	400	38	20	70	194	35	33	149	61	0	45	132	287	3069	35	71	887	23	1
Peptostreptococcaceae_[G-4] bacterium_HMT_369 (SP511)	0	0	0	0	0	0	0	18	6	0	0	0	13	0	0	0	0	97	5	0	35
Leptotrichia sp._HMT_392 (SP512)	113	42	2	5	23	14	0	1324	5	15	6	0	28	69	4	62	1	44	53	9	8
Streptococcus downei (SP514)	6	16	18	0	2	67	0	5	17	108	1	8	13	14	165	32	5	24	10	6	13
Streptococcus dentirousetti (SP515)	3563	149	526	1608	172	16	113	2338	3429	0	2297	344	813	318	374	355	102	1452	12	2299	1961
Limosilactobacillus mucosae (SP518)	186	0	0	0	7	2	0	70	35	0	0	0	0	13	0	0	0	0	79	0	318
Streptococcus macedonicus (SP519)	233	75	488	11	111	1	242	7	40	3	60	63	5	235	5	86	51	108	19	19	48
Veillonella sp._HMT_917 (SP522)	0	0	134	0	0	45	0	8	882	0	4	5	1	0	60	167	264	17	0	12	0
Prevotella multiformis (SP523)	0	0	186	0	0	0	0	0	137	0	0	0	5	170	44	293	0	347	24	0	50
Enterococcus saccharolyticus (SP526)	0	1	3	9	0	0	0	0	0	0	0	0	9	0	9	0	0	0	0	61	0
Enterococcus gallinarum (SP527)	11	0	1	0	0	21	6	17	10	24	0	0	0	10	6	9	0	9	4	0	3
Capnocytophaga sp._HMT_901 (SP53)	8	0	7	0	0	0	0	493	0	0	0	0	7	0	0	0	0	30	0	0	1
Priestia flexa (SP538)	0	0	95	0	0	11	0	0	43	10	17	0	0	65	8	16	26	4	0	0	0
Priestia qingshengii (SP540)	4	47	1	0	14	0	4	20	0	0	2	1	4	16	1	6	7	10	6	5	3
Oribacterium sp._HMT_102 (SP541)	0	0	0	0	0	0	0	5	18	0	0	0	0	2	1	40	0	0	12	0	4
Aggregatibacter actinomycetemcomitans (SP542)	0	9	245	747	0	0	89	0	0	0	0	45	85	98	0	0	0	0	0	0	27
Selenomonas sp._HMT_136 (SP547)	9	22	0	0	5	0	0	16	4	0	6	1	0	9	3	54	0	7	77	0	3
Fannyhessea sp._HMT_416 (SP55)	0	0	0	0	0	0	0	1	20	0	0	0	0	1	0	0	0	0	0	0	8
Prevotella fusca (SP551)	26	5	2	0	8	0	0	0	0	0	0	5	9	17	0	9	0	10	0	0	0
Stomatobaculum longum (SP558)	455	60	410	7	42	148	3	85	483	128	55	7	21	185	103	671	23	46	334	86	37
Corynebacterium xerosis (SP559)	649	41	463	62	1153	190	70	60	268	1078	22	271	413	43	426	514	16	52	143	1509	1255
Leptotrichia sp._HMT_417 (SP56)	1072	4124	185	102	46	259	18	517	493	51	529	225	64	127	569	781	49	665	225	1646	516
Peptostreptococcaceae_[G-6] [Eubacterium]_nodatum (SP561)	0	0	1	0	0	0	0	0	0	0	0	0	11	0	0	0	0	31	0	0	108
Pseudomonas cremoricolorata (SP568)	151	110	256	18	32	396	23	30	779	359	32	1	32	53	261	466	39	110	232	87	74
Pseudomonas putida (SP569)	104	44	2	26	4	40	21	373	0	5	26	0	39	70	20	3	59	67	140	9	3
Pseudomonas straminea (SP570)	10	25	2	23	0	2	4	145	14	0	0	2	12	1	2	439	0	75	10	10	4
Pseudomonas cuatrocienegasensis (SP573)	239	4	5	44	0	8	0	937	187	27	3	17	29	93	8	0	483	30	0	2	0
Ruminococcaceae_[G-1] bacterium_HMT_075 (SP577)	68	134	1	38	56	14	6	493	12	11	25	5	7	21	15	29	4	39	131	17	14
Treponema maltophilum (SP578)	0	7	3	0	0	0	2	525	13	1	0	0	0	34	0	5	0	23	29	0	3
Butyrivibrio sp._HMT_455 (SP585)	14	0	14	0	0	33	0	32	165	11	5	0	0	4	0	104	0	51	8	1	0
Megasphaera micronuciformis (SP603)	17	86	601	4	6	212	16	219	693	476	78	12	24	138	212	172	109	29	69	25	70
Enterobacter bugandensis (SP608)	0	0	0	11	0	0	0	104	0	0	0	0	1	0	0	0	0	1	0	0	0
Kluyvera intermedia (SP625)	59	9	28	48	11	4	11	0	6	5	8	71	9	0	7	22	2	29	4	46	0
Leptotrichia buccalis (SP63)	3	96	0	0	12	5	0	501	3	4	33	8	24	52	6	5	2	111	12	37	24
Fretibacterium sp._HMT_360 (SP635)	0	0	2	5	0	1	5	0	31	2	0	0	0	13	9	0	0	47	2	3	5
Peptidiphaga sp._HMT_183 (SP636)	1	8	27	2	130	1	18	5	55	0	1	20	15	0	4	16	0	73	36	7	22
Leptotrichia goodfellowii (SP657)	262	473	488	286	5	967	82	44	6295	98	646	78	23	33	447	171	105	585	78	134	115
Dialister propionicifaciens (SP658)	15	82	47	0	12	0	0	0	4	0	12	13	0	0	9	0	0	10	3	3	9
Klebsiella grimontii (SP667)	331	861	111	156	155	192	286	1376	30	144	95	121	63	960	230	61	112	544	291	198	710
Arthrobacter livingstonensis (SP669)	30	1	167	39	11	264	124	5	211	25	103	0	11	182	82	68	1	131	15	17	132
Arthrobacter oryzae (SP688)	3	0	23	17	0	1	37	0	222	0	0	4	19	55	70	0	0	737	232	3	700
Lancefieldella rimae (SP690)	202	21	5	28	5	9	4	1008	65	16	13	17	5	69	23	21	0	61	27	45	35
Pluralibacter gergoviae (SP692)	0	1	0	25	0	0	0	0	115	0	0	4	0	2	0	0	4	0	0	0	0
Citrobacter sedlakii (SP693)	17	0	25	24	0	3	16	179	187	0	0	3	7	30	12	0	0	145	87	12	40
Ruminococcaceae_[G-2] bacterium_HMT_085 (SP701)	52	10	355	12	1	89	13	35	731	105	17	9	7	56	24	71	0	40	15	29	11
Corynebacterium matruchotii (SP712)	148	1198	61	39	115	39	34	50	13	158	4	128	243	18	38	43	1	229	24	284	298
Peptostreptococcaceae_[G-9] [Eubacterium]_brachy (SP731)	42	10	25	56	2	8	61	216	140	2	1	0	36	21	20	287	0	307	168	54	147
Ottowia sp._HMT_894 (SP732)	0	0	0	27	0	1	28	85	0	0	0	0	1	3	0	2	0	19	4	0	0
Kocuria flava (SP734)	0	0	2	9	0	0	6	43	71	0	0	0	1	14	3	8	0	144	24	5	44
Treponema sp._HMT_256 (SP752)	0	0	1	3	0	0	0	0	0	0	0	2	0	0	13	0	0	0	0	0	0
Porphyromonas catoniae (SP753)	0	0	0	0	0	0	16	0	11	0	0	0	0	1	4	0	0	85	2	0	1
Actinomyces graevenitzii (SP760)	6	9	142	5	0	915	4	9	1022	414	0	0	26	35	137	80	43	22	53	21	57
Catonella sp._HMT_164 (SP77)	0	0	3	7	0	0	0	0	19	0	0	0	3	5	1	16	0	65	4	0	0
Leptotrichia sp._HMT_225 (SP776)	154	255	94	97	0	1	354	104	40	2	21	0	90	342	17	2	4	218	150	26	7
Fusobacterium sp._HMT_248 (SP78)	848	11	34	0	0	0	0	308	18	0	3	0	0	0	0	0	2	27	0	25	0
Brevibacterium oceani (SP780)	0	0	27	0	0	1	9	20	85	0	0	3	4	30	0	60	0	39	1	0	28
Morococcus cerebrosus (SP787)	0	0	0	12	0	0	7	6	10	0	0	0	4	0	23	0	0	18	30	0	63
Neisseria flava (SP788)	2	17	17	33	29	47	4	85	17	11	1	7	20	31	5	7	49	103	13	3	7
Neisseria mucosa (SP789)	59	3	0	2	0	1	0	0	14	3	0	6	1	15	14	26	0	13	19	5	13
Leptotrichia sp._HMT_498 (SP79)	754	3084	41	19	70	5	0	486	54	26	68	51	35	67	40	193	3	310	90	228	213
Micrococcus endophyticus (SP801)	141	12	18	11	21	39	28	92	35	0	10	15	50	4	8	61	0	31	2	51	124
Micrococcus antarcticus (SP803)	539	0	311	181	1	0	0	0	0	0	5	0	0	0	0	5	1	0	0	0	0
Micrococcus yunnanensis (SP805)	0	3	91	0	0	135	16	0	1	12	73	0	6	247	130	55	316	0	0	0	0
Campylobacter concisus (SP811)	70	128	145	8	31	83	138	48	275	160	76	5	15	165	108	340	201	216	178	32	57
Oribacterium parvum (SP812)	1	1	4	4	0	235	0	12	44	17	23	0	6	37	0	1	2	37	22	0	0
Clostridioides difficile (SP822)	16	0	0	0	0	16	5	13	10	24	0	0	0	15	5	8	0	10	7	0	1
Oribacterium sp._HMT_078 (SP823)	208	6	11	5	5	1	5	105	20	5	1	12	13	15	10	217	6	55	128	14	9
Bacteroidetes_[G-5] bacterium_HMT_507 (SP827)	0	0	8	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0
Schaalia sp._HMT_172 (SP845)	128	53	400	15	0	885	246	37	495	944	14	0	47	54	166	271	21	626	1875	14	50
Kingella sp._HMT_459 (SP85)	0	8	16	58	2	4	13	36	0	0	3	0	17	16	5	3	13	13	101	4	4
Leuconostoc holzapfelii (SP871)	15	23	63	19	0	887	20	475	199	92	13	0	11	75	98	183	12	82	218	25	17
Pseudoramibacter alactolyticus (SP875)	66	0	0	0	0	0	0	3	9	0	0	5	0	1	22	13	0	4	42	0	7
Selenomonas artemidis (SP88)	0	0	7	3	0	0	0	0	0	0	0	3	0	16	0	0	0	47	0	4	0
Treponema lecithinolyticum (SP90)	0	0	2	19	0	0	51	1	144	0	0	4	3	22	33	0	0	123	0	22	85
Streptococcus parasanguinis_clade_411 (SP91)	0	0	30	12	0	0	7	0	0	0	0	13	15	18	0	0	1	0	0	0	0
Streptococcus parasanguinis (SP93)	0	2	36	3	53	7	0	1	0	0	3	12	90	4	24	0	83	6	0	53	0
Streptococcus sp._HMT_057 (SP94)	4	5	7	23	85	43	16	168	0	2	4	8	83	49	22	8	22	101	113	35	7
Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP1)	1	3	3	25	1	0	13	116	2	0	0	0	8	1	0	18	65	8	52	3	2
Fusobacterium nucleatum_subsp._animalis_simiae (SPP10)	222	108	4	7	9	24	14	490	46	7	19	2	31	42	12	211	0	48	33	28	5
Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 (SPP105)	136	139	196	64	1372	565	29	3337	113	705	169	9	430	2977	116	16	76	660	14	70	338
Atopobium_Lancefieldella rimae (SPP106)	201	12	5	22	4	9	4	0	65	16	13	17	5	61	17	6	0	26	25	45	35
Prevotella shahii_sp._HMT_317 (SPP107)	0	188	8	1	19	5	0	8	6	0	2	0	1	27	0	2	0	26	19	0	4
Lactobacillus_Streptococcus constellatus_salivarius (SPP109)	42	3	3	41	8	5	1	283	134	12	13	28	76	14	12	215	0	180	262	36	487
Fusobacterium_Streptococcus downii_nucleatum_subsp._animalis (SPP11)	680	386	121	185	105	52	87	325	192	106	75	16	98	140	89	448	4	208	122	124	61
Streptococcus dentirousetti_downei_sobrinus (SPP111)	82	40	2	0	13	8	0	0	7	0	0	16	0	0	192	6	0	0	402	0	18
Streptococcus downei_porcinus_salivarius_thermophilus_uberis_ves ...(6 species) (SPP112)	32	122	114	10	17	192	2	30	161	869	9	42	83	60	506	123	0	187	77	52	137
Selenomonas sp._HMT_136_sp._HMT_149_sp._HMT_478 (SPP118)	44	49	25	10	9	43	9	20	174	3	14	32	2	16	18	135	53	26	144	9	9
Fusobacterium hwasookii_sp._HMT_370 (SPP119)	135	585	22	23	32	11	28	1600	9	9	152	5	165	164	2	17	14	106	20	17	12
Lachnoanaerobaculum gingivalis_umeaense (SPP121)	38	95	20	18	8	419	25	236	13	107	27	0	63	86	69	28	8	153	260	16	5
Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 (SPP13)	4305	610	537	3543	929	1675	815	7439	2924	1350	1369	267	4130	370	3812	2134	219	3857	1292	2718	6225
Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) (SPP131)	1518	580	236	99	262	328	136	1433	199	1151	35	52	1091	185	622	694	2	1013	514	721	917
Leptotrichia buccalis_sp._HMT_225 (SPP132)	13	72	0	17	2	19	0	23	0	5	14	2	2	26	14	1	4	28	26	8	11
Kingella_Neisseria denitrificans_elongata (SPP133)	7	101	42	61	10	235	25	456	1	178	8	1	228	190	386	12	80	147	247	15	16
Campylobacter rectus_showae (SPP141)	28	28	43	24	22	8	217	663	56	6	0	12	20	178	52	8	1	501	151	2	109
Porphyromonas pasteri_sp._HMT_278 (SPP147)	44	199	135	33	58	609	153	2452	709	1103	168	1	135	626	274	17	41	364	49	17	41
Porphyromonas catoniae_pasteri_sp._HMT_278 (SPP148)	52	16	128	26	0	0	1	274	57	0	15	3	8	4	0	0	9	40	4	253	0
Neisseria_Streptococcus canis_sp._HMT_057 (SPP149)	7	12	7	0	23	2	0	2	0	11	0	2	13	27	0	0	0	33	1	0	6
Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) (SPP150)	803	33	274	1106	509	19	492	1391	2783	617	2253	105	380	610	126	151	337	608	48	432	599
Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 (SPP151)	1	1	31	14	8	1	18	32	0	2	3	0	3	16	0	0	68	8	2	8	0
Selenomonas sp._HMT_442_sputigena (SPP152)	74	216	20	4	2	5	6	298	123	3	7	32	17	96	29	347	3	135	509	110	152
Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP153)	6	12	3	0	2	18	0	84	4	11	4	0	5	3	0	0	0	1	0	7	0
Hallella_Prevotella dentalis_seregens (SPP155)	0	0	1	0	0	1	0	3	31	0	0	2	1	2	0	13	0	72	13	1	116
Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca (SPP156)	2869	3056	252	1406	588	3158	181	1926	10	562	1445	62	3425	5073	408	334	4313	1278	895	1323	1223
Streptococcus salivarius_thermophilus_vestibularis (SPP159)	191	651	804	670	416	2028	175	168	1365	7964	32	790	267	574	8135	2831	1	1797	1084	773	1042
Kingella sp._HMT_459_sp._HMT_932 (SPP165)	0	6	1	28	0	3	2	80	12	23	0	0	0	0	0	2	5	23	4	4	10
Lactobacillus delbrueckii_equicursoris_leichmannii (SPP17)	149	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	207	0	0
Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) (SPP170)	346	282	1030	332	309	1779	129	255	1103	4565	26	43	1046	311	2779	3786	3	1021	2789	181	431
Streptococcus parasanguinis_sp._HMT_057 (SPP171)	0	27	0	0	0	12	0	28	0	0	1	0	40	8	5	0	3	14	2	0	0
Streptococcus gordonii_himalayensis_sp._HMT_056 (SPP22)	932	1010	222	139	144	499	36	1006	332	1733	89	156	1358	255	1324	434	2	1662	1369	534	1142
Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) (SPP25)	5	73	19	1	8	2	2	180	47	6	8	6	25	103	3	18	1	126	182	47	50
Haemophilus_Pseudomonas cuatrocienegasensis_paraphrohaemolyticus_sputorum (SPP26)	292	7	78	265	10	40	0	15	6	423	147	0	41	11	0	0	139	93	99	0	19
Aggregatibacter aphrophilus_paraphrophilus (SPP27)	0	1	0	54	0	5	0	0	0	0	0	2	16	0	2	0	178	6	0	5	0
Aggregatibacter_Selenomonas_Treponema aphrophilus_maltophilum_noxia (SPP28)	86	165	3	0	1	2	8	100	8	0	0	0	3	3	3	0	2	3	12	10	3
Lautropia dentalis_mirabilis (SPP29)	99	70	8	139	1	10	176	1	0	0	14	54	86	2	5	0	2376	2	5	67	8
Fusobacterium_Haemophilus_Streptococcus canifelinum_downii_naviforme_nucleatum_subsp._poly ...(6 species) (SPP3)	134	124	71	0	13	4	3	278	21	1	6	1	39	127	16	172	19	47	10	6	51
Prevotella sp._HMT_306_vespertina (SPP31)	37	250	621	38	4	264	0	26	1114	778	186	29	10	1268	232	68	1497	51	79	361	68
Lautropia_Prevotella histicola_mirabilis_scopos_sp._HMT_306_sp._HMT_313 ...(7 species) (SPP32)	17	28	56	0	0	29	0	5	53	38	21	0	2	128	21	1	61	14	1	6	0
Bacillus_Parvimonas_Peptostreptococcus Candidatus massiliensis_paranthracis_sp._HMT_110_s ...(4 species) (SPP34)	33	2	0	12	0	187	2	323	0	2	1	4	44	31	16	26	1	269	272	21	0
Mogibacterium diversum_neglectum_pumilum_vescum (SPP35)	237	16	19	11	3	509	7	222	607	141	3	1	11	14	131	509	5	131	376	55	27
Neisseria cinerea_flavescens_perflava_subflava (SPP36)	449	618	1058	4702	46	5885	262	4952	1795	7513	65	1	2523	4337	1482	443	491	1920	3260	31	267
Treponema maltophilum_sp._HMT_260 (SPP37)	0	0	1	0	0	0	1	0	11	0	0	4	0	22	9	0	0	38	28	0	8
Fusobacterium_Streptococcus canifelinum_downii_nucleatum_subsp._polymorphum_sp ...(4 species) (SPP4)	303	566	76	47	156	69	148	1209	13	52	75	5	197	2561	48	293	46	212	799	74	564
Mogibacterium_Prevotella diversum_histicola (SPP41)	9	40	264	0	0	91	0	11	86	256	48	0	9	359	49	11	148	25	2	6	9
Lautropia_Mogibacterium_Prevotella diversum_histicola_mirabilis_scopos_sp._HMT_313_sp ...(6 species) (SPP42)	35	114	41	0	6	96	2	34	27	44	92	1	15	141	1	98	5	50	1	40	23
Lautropia_Mogibacterium_Prevotella diversum_fusca_histicola_mirabilis_scopos_sp._HMT_ ...(7 species) (SPP43)	0	0	0	0	0	72	3	0	0	7	0	0	0	0	26	1	0	1	0	0	0
Mogibacterium_Prevotella diversum_scopos_sp._HMT_314 (SPP44)	133	1264	123	6	364	88	34	1159	214	24	464	25	174	1886	29	28	9	548	101	829	1112
Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP45)	0	5	13	13	3	0	0	0	0	0	14	5	16	0	1	0	7	0	0	6	0
Alloprevotella_Escherichia_Treponema coli_medium_sp._HMT_230_sp._HMT_913 (SPP46)	3	5	21	0	5	1	0	0	0	0	0	0	4	59	1	0	0	35	14	3	5
Escherichia_Treponema coli_medium (SPP47)	3	5	21	3	0	1	0	0	14	0	0	4	16	25	0	77	2	233	0	0	12
Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP5)	15290	3428	7956	10046	7636	8487	6207	13666	11021	13211	13171	2346	7677	6975	6321	6890	44	13183	6933	13160	20410
Leptotrichia_Pseudomonas putida_sp._HMT_215 (SPP51)	4	5	0	0	0	5	0	12	2	0	0	0	0	1	0	0	0	2	5	0	0
Leptotrichia_Pseudomonas putida_sp._HMT_215_sp._HMT_217 (SPP52)	0	0	0	0	0	9	1	75	0	0	0	0	0	1	0	0	0	6	0	0	0
Veillonella parvula_rogosae_tobetsuensis (SPP57)	298	252	84	58	77	1205	382	1175	69	601	140	18	82	1081	397	112	213	532	332	52	156
Lautropia_Prevotella mirabilis_scopos_sp._HMT_313_sp._HMT_314 (SPP59)	362	45	47	6	1	11	0	9	20	50	67	0	10	288	34	9	16	91	3	2	3
Fusobacterium_Streptococcus downii_nucleatum_subsp._nucleatum_sp._HMT_203 (SPP6)	116	91	2	0	19	42	328	163	4	10	5	2	23	153	22	20	1	259	48	87	230
Lautropia_Prevotella mirabilis_sp._HMT_313 (SPP60)	62	369	695	25	0	38	28	58	608	1222	876	3	20	914	10	374	290	331	6	101	47
Tannerella sp._HMT_286_sp._HMT_808 (SPP61)	204	152	14	12	46	13	1	582	7	8	45	1	53	114	6	34	12	114	10	27	6
Leptotrichia_Veillonella atypica_goodfellowii (SPP62)	309	4	3	23	46	5	30	17	0	3	1	0	0	50	4	19	92	2	163	6	21
Klebsiella_Veillonella atypica_grimontii (SPP63)	1035	937	4588	213	222	2299	222	958	1969	4259	749	72	170	3606	3815	1115	1709	1326	586	696	1031
Alloprevotella_Treponema sp._HMT_250_sp._HMT_913 (SPP64)	14	12	16	0	44	0	0	30	2	0	1	0	1	82	11	0	0	6	0	0	3
Prevotella scopos_sp._HMT_314 (SPP65)	14	59	78	20	1	5	44	29	7	5	32	14	63	398	0	6	1	352	1	18	22
Fretibacterium sp._HMT_358_sp._HMT_359_sp._HMT_361_sp._HMT_362 (SPP66)	0	0	6	0	0	0	0	0	17	0	0	0	2	6	1	0	0	238	1	0	52
Prevotella_Staphylococcus sp._HMT_313_warneri (SPP67)	12	130	55	0	5	44	0	9	46	65	35	0	15	295	19	3	80	13	6	21	6
Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 (SPP68)	75	207	33	17	128	22	22	4	9	10	3	106	43	5	2	9	3	26	82	36	31
Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) (SPP69)	726	290	290	86	280	225	78	39	51	127	3	268	211	36	89	58	51	77	571	486	150
Fusobacterium_Haemophilus_Streptococcus downii_naviforme_sputorum (SPP7)	3590	163	163	197	228	2	265	287	496	0	20	41	61	148	193	409	4	246	3	116	254
Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] bacterium_HMT_081_stomatis (SPP71)	0	0	10	0	0	4	0	0	91	0	0	3	12	0	9	19	0	19	0	7	100
Bacteroidaceae_[G-1]_Staphylococcus bacterium_HMT_272_simiae (SPP75)	14	0	0	0	0	0	0	9	19	0	0	0	0	5	1	0	0	27	3	0	2
Peptococcus sp._HMT_167_sp._HMT_168 (SPP77)	52	43	15	11	0	5	15	25	1	0	0	2	3	4	7	1	0	30	4	0	14
Streptococcus lactarius_peroris_sp._HMT_074 (SPP79)	13	12	10	2	5	37	1	9	12	39	3	1	38	10	32	11	0	18	26	5	10
Streptococcus australis_lactarius_parasanguinis_parasanguinis_cl ...(10 species) (SPP80)	353	204	158	7	28	211	3	345	147	587	19	6	748	75	216	180	0	280	210	91	268
Bifidobacterium dentium_moukalabense (SPP83)	9	1	0	0	0	18	0	27	46	0	0	0	0	0	0	2	0	0	192	37	715
Porphyromonas endodontalis_sp._HMT_285 (SPP88)	0	0	12	10	0	0	76	42	389	2	0	2	73	34	239	686	1	522	0	67	728
Prevotella loescheii_sp._HMT_472 (SPP89)	54	68	10	19	0	0	0	16	0	0	3	2	11	131	0	3	7	0	4	1	8
Aggregatibacter sp._HMT_513_sp._HMT_898 (SPP91)	29	1	0	21	2	10	8	3	0	23	53	0	26	66	1	0	13	38	13	5	8
Schaalia odontolytica_odontolyticus_sp._HMT_180 (SPP92)	164	41	899	8	14	1042	56	77	193	512	1	2	40	111	57	194	4	32	196	30	64
Kocuria assamensis_palustris (SPP93)	0	2	1	7	2	0	0	0	0	0	0	12	0	0	0	0	0	0	0	1	0
Acinetobacter_Catonella guillouiae_sp._HMT_164 (SPP96)	4	7	10	1	1	1	2	85	6	0	1	6	26	18	0	16	7	11	10	7	21
Acinetobacter_Prevotella sp._HMT_292_sp._HMT_293_vivianii (SPP97)	1	60	15	3	19	0	12	7	0	0	4	2	0	19	3	36	0	7	2	18	19
Atopobium_Lancefieldella parvula_parvulum (SPP98)	134	33	102	27	4	1143	28	170	825	919	30	4	18	305	271	474	46	96	281	64	70
